![]() If you have Mendeley 1.18 and haven’t yet upgraded to Mendeley 1.19 or later: Upgrade to Mendeley 1.18 using theand then start the import in Zotero by going to File → “Import…” and choosing the “Mendeley” option. If you have a Mendeley version older than 1.18: Zotero's word processor plugins can, however, read Mendeley citations and their embedded metadata, so you can continue using the same documents with Zotero. ![]() When using the Zotero word processor plugins, document citations created with Mendeley won’t currently be linked to imported citations in your Zotero database. When possible, those will be used automatically in citations (e.g., Original Date), and future versions of Zotero will automatically convert those to any real fields that become available. When importing into Zotero, if a field isn’t valid for a given item type, the field is placed into the Extra field. Mendeley allows any field to be added to any type. You can then create a Zotero group and drag imported collections or items to that group. To import items in group libraries, simply copy the group items to a collection in your Mendeley library before importing. It’s not possible to directly import group libraries. Script to write annotations and highlights back to the PDFs in Mendeley before importing into Zotero. You can also try using the third-party Menextract2pdf But if you’re able to satisfactorily export annotations and/or highlights, you could use that option for one or more files and then replace the imported files in Zotero (right-click on the item and choose “Show File”) with the annotated versions. In our testing, exported PDFs also don’t always contain the text of annotations. Prior to Mendeley 1.19.3, that option could only be run for one file at a time in 1.19.3, it can be run for multiple files but doesn’t include highlights. Mendeley provides an option to generate a PDF with annotations and highlights added back to the file. To embed annotations and highlights into the PDF files themselves so they can be imported into Zotero, you have a couple options: Mendeley stores PDF annotations and highlights in its database rather than storing them in the file where they would be accessible to other PDF readers, so Zotero extracts annotations to a note stored under the item, with links back to the original page. In addition to the database encryption discussed above, there are a few other issues to be aware of when importing from Mendeley. The API is under Elsevier’s control and can be changed or discontinued at any time. Mendeley offers a web-based API, but it only contains uploaded data, so relying on it would mean that anyone wanting to export their own data would first need to upload all their data and files to Elsevier’s servers. The export formats supported by Mendeley don’t contain folders, various metadata fields (date added, favorite, and others), or PDF annotations. That the change was required by new European privacy regulations - a bizarre claim, given that those regulations are designed to give people control over their data and guarantee data portability, not the opposite - and continued to assert, falsely, that full local export was still possible, while repeatedly dismissingĭirect access to the Mendeley database is the only local way to export the full contents of one’s own research. At the same time, Mendeley continues to import data from Zotero’s own open database, as it has since 2009.Ĭlaimed that the encryption was for “improved security” on shared machines, yet applications rarely encrypt their local data files, as file protections are generally handled by the operating system with account permissions and full-disk encryption, and anyone using the same operating system account or an admin account can already install a keylogger to capture passwords. In its documentation that the database can be accessed using standard tools. Elsevier made this change a few months after Zotero publicly announced work on an importer, despite having long touted the openness of its database format as a guarantee against lock-in and erroneously continuing to state Mendeley 1.19 and later have begun encrypting the local database, making it unreadable by Zotero and other standard database tools. Zotero includes support for directly importing a Mendeley database into Zotero via File → “Import…”, but due to recent changes by Elsevier, the company that produces the Mendeley software, some extra steps may be required. How do I import a Mendeley library into Zotero? ![]()
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